12.4. Direct Transport Model

12.4.1. Description

With this example we illustrate the usage of reactions with absolute orientation. Volume molecules v in the interior of a cube react with surface molecules s, producing volume molecules r in the exterior of the cube (reaction v@IN + s -> s + r@OUT).

12.4.2. Demonstrated features

  • Reactions with absolute orientation.

  • Usage of BioNetGen compartments.